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View Structure Prediction Details

Protein: gi|18420069, gi|...
Organism: Arabidopsis thaliana
Length: 452 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18420069, gi|....

Description E-value Query
Range
Subject
Range
gi|23297225, gi|... - gi|23297225|gb|AAN12921.1| putative formamidase [Arabidopsis thaliana], gi|18420071|ref|NP_568029.1|...
640.0 [0..1] [452..1]

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Predicted Domain #1
Region A:
Residues: [1-452]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLSPRVVV KVDLKKKPWQ QDQPLHNRWH PEIPPVAEVK AGEFFRVEMI DAMGGVIKDN  60
   61 DSASDIKNLV LTTTHHLSGP IRVVDEEGVA AKAGDLLAVE ICNLGPLPGD EWGFTGSFDR 120
  121 ENGGGFLTDH FPCATKAIWY FEGIYAYSPQ IPGVRFPGLT HPGVIGTAPS NELLRIWNDR 180
  181 ERQLEESGVE SLTLCEVVHQ RPLACLPTTK GCLLGNIEEG TPEWERIANE AARTIPGREN 240
  241 GGNCDIKNLS RGSKIYLPVF VEGANLSTGD MHFSQGDGEI SFCGAIEMSG FLELKCEIIR 300
  301 NGMQEYLTPM GPTPLHVNPI FEIGPVEPRF SEWLVFEGIS VDESGKQHYL DATVAYKRAV 360
  361 LNAIDYLFKF GYSKEQVYLL LSCCPCEGRL SGIVDSPNAV ATLAIPTAIF DQDIRPKNRK 420
  421 VPVGPRVVRK PDVLKSTYDG KLPITKNPSS SS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.045757
Match: 2ii1A
Description: No description for 2ii1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle