| Protein: | Y4372_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 768 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y4372_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
398.0 | [0..2] | [763..345] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI 60
61 SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN SFNGPLPVSF FNARELRFLD 120
121 LSS
|
| Detection Method: |  |
| Confidence: | 21.0 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [124-355] |
1 11 21 31 41 51
| | | | | |
1 NMISGEIPSA IGDLHNLLTL NLSDNALAGK LPTNLASLRN LTVVSLENNY FSGEIPGGWR 60
61 VVEFLDLSSN LINGSLPPDF GGYSLQYLNV SFNQISGEIP PEIGVNFPRN VTVDLSFNNL 120
121 TGPIPDSPVF LNQESNFFSG NPGLCGEPTR NPCLIPSSPS IVSEADVPTS TPAIAAIPNT 180
181 IGSNPVTDPN SQQTDPNPRT GLRPGVIIGI VVGDIAGIGI LAVIFLYIYR CK
|
| Detection Method: | |
| Confidence: | 4.76 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [356-768] |
1 11 21 31 41 51
| | | | | |
1 KNKIVDNNNN DKQRTETDTI TLSTFSSSSS SPEESRRFRK WSCLRKDPET TPSEEEDEDD 60
61 EDEESGYNAN QRSGDNKLVT VDGEKEMEIE TLLKASAYIL GATGSSIMYK AVLEDGRVFA 120
121 VRRLGENGLS QRRFKDFEPH IRAIGKLVHP NLVRLCGFYW GTDEKLVIYD FVPNGSLVNP 180
181 RYRKGGGSSS PYHLPWETRL KIAKGIARGL AYLHEKKHVH GNLKPSNILL GHDMEPKIGD 240
241 FGLERLLTGE TSYIRAGGSS RIFSSKRYTT SSREFSSIGP TPSPSPSSVG AMSPYCAPES 300
301 FRSLKPSPKW DVYGFGVILL ELLTGKIVSV EEIVLGNGLT VEDGHRAVRM ADVAIRGELD 360
361 GKQEFLLDCF KLGYSCASPV PQKRPTMKES LAVLERFHPN SSVIKSSSFH YGH
|
| Detection Method: | |
| Confidence: | 66.522879 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
