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View Structure Prediction Details

Protein: gi|30690848, gi|...
Organism: Arabidopsis thaliana
Length: 372 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30690848, gi|....

Description E-value Query
Range
Subject
Range
gi|21592617 - gi|21592617|gb|AAM64566.1| patatin-like protein [Arabidopsis thaliana]
302.0 [0..1] [372..1]

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Predicted Domain #1
Region A:
Residues: [1-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKSPSKKN KPPSCGSLVT ILSLDGGGVR GIIAGELDGE EARLADYFDV IAGTSTGGLV  60
   61 TAMLTVPDET GRPHFAAKDI VPFYLEHCPK IFPQPTGVLA LLPKLPKLLS GPKYSGKYLR 120
  121 NLLSKLLGET RLHQTLTNIV IPTFDIKKLQ PTIFSSYQLL VDPSLDVKVS DICIGTSAAP 180
  181 TFFPPHYFSN EDSQGNKTEF NLVDGAVTAN NPTLVAMTAV SKQIVKNNPD MGKLKPLGFD 240
  241 RFLVISIGTG STKREEKYSA KKAAKWGIIS WLYDDGSTPI LDITMESSRD MIHYHSSVVF 300
  301 KALQSEDKYL RIDDDTLEGD VSTMDLATKS NLENLQKIGE KMLTNRVMQM NIDTGVYEPV 360
  361 AENITNDEQL KR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.30103
Match: 1oxwA
Description: Patatin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.15125075554295 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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