YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TKPR1_ARATH
Organism: Arabidopsis thaliana
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TKPR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|41205692 - gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus]
252.0 [0..7] [323..4]

Back

Predicted Domain #1
Region A:
Residues: [1-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQAKGKVCV TGASGFLASW LVKRLLLEGY EVIGTVRDPG NEKKLAHLWK LEGAKERLRL  60
   61 VKADLMEEGS FDNAIMGCQG VFHTASPVLK PTSNPEEEIL RPAIEGTLNV LRSCRKNPSL 120
  121 KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN 180
  181 GIDLVTVLPS FLVGPSLPPD LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV 240
  241 FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK 300
  301 FKSLEEMFDD CIASLVEQGY LSTVLP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.221849
Match: 2c29D
Description: No description for 2c29D was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle