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View Structure Prediction Details

Protein: gi|22329176
Organism: Arabidopsis thaliana
Length: 111 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22329176.

Description E-value Query
Range
Subject
Range
gi|4927412 - gi|4927412|gb|AAD33097.1|AF082525_1 homoserine kinase [Arabidopsis thaliana]
109.0 [0..54] [111..306]
gi|50916172, gi|... - gi|50916172|ref|XP_468550.1| putative homoserine kinase [Oryza sativa (japonica cultivar-group)], gi...
69.0 [0..60] [110..319]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQKTQNLPM NHCIEDRPNH RAACVIAETE LEATNHRARG YKVNKSLSAL NGKEAGAFGR  60
   61 TITAVAVIDT AEKGYEIGEK MVQVFLKIGN LKSTASVKKL DKVGARLIES M

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.813 c.55.1 Actin-like ATPase domain
View Download 0.686 d.58.19 Bacterial exopeptidase dimerisation domain
View Download 0.686 d.58.19 Bacterial exopeptidase dimerisation domain
View Download 0.639 c.46.1 Rhodanese/Cell cycle control phosphatase
View Download 0.591 a.1.1 Globin-like
View Download 0.579 d.58.19 Bacterial exopeptidase dimerisation domain
View Download 0.573 d.68.4 YhbY-like
View Download 0.573 d.68.4 YhbY-like
View Download 0.558 a.1.1 Globin-like
View Download 0.438 d.52.8 Description not found.
View Download 0.371 a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.350 d.326.1 Description not found.
View Download 0.341 a.165.1 Myosin phosphatase inhibitor 17kDa protein, CPI-17


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle