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View Structure Prediction Details

Protein: CAES_ARATH
Organism: Arabidopsis thaliana
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAES_ARATH.

Description E-value Query
Range
Subject
Range
gi|75766300, gi|... - gi|75766303|pdb|2APJ|D Chain D, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1....
365.0 [0..1] [260..1]

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Predicted Domain #1
Region A:
Residues: [1-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGSITPGE DKPEIQSPIP PNQIFILSGQ SNMAGRGGVF KDHHNNRWVW DKILPPECAP  60
   61 NSSILRLSAD LRWEEAHEPL HVDIDTGKVC GVGPGMAFAN AVKNRLETDS AVIGLVPCAS 120
  121 GGTAIKEWER GSHLYERMVK RTEESRKCGG EIKAVLWYQG ESDVLDIHDA ESYGNNMDRL 180
  181 IKNLRHDLNL PSLPIIQVAI ASGGGYIDKV REAQLGLKLS NVVCVDAKGL PLKSDNLHLT 240
  241 TEAQVQLGLS LAQAYLSNFC 

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Detection Method: PSI-BLAST
Confidence: 103.0
Match: 2apjA
Description: X-Ray Structure of Protein from Arabidopsis Thaliana AT4G34215 at 1.6 Angstrom Resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.62968473581251 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle