YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MYO15_ARATH
Organism: Arabidopsis thaliana
Length: 1522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for MYO15_ARATH.

Predicted Domain #1
Region A:
Residues: [1-1053]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNCLPMELN LRKGDKVWVE DKDLAWIAAD VLDSFDNKLH VETSTGKKVF VSPEKLFRRD  60
   61 PDDEEHNGVD DMTKLTYLHE AGVLYNLQRR YALNDIYTYT GSILIAVNPF KKLPHLYNGH 120
  121 MMEQYMGAPF GELSPHVFAV SDVAYRAMID DSRSQSILVS GESGAGKTET TKLIMQYLTF 180
  181 VGGRATDDDR SVEQQVLESN PLLEAFGNAK TVRNDNSSRF GKFVEIQFDT NGRISGAAIR 240
  241 TYLLERSRVV RITDPERNYH CFYQLCASGN DAEKYKLSNP RQFHYLNQSK TYELEGVSSA 300
  301 EEYKNTRRAM DIVGISQDEQ EGIFRTLAAI LHLGNVEFSS GREHDSSVVK DPESRHHLQM 360
  361 AADLFKCDAN LLLASLCTRS ILTREGIIIK ALDPNAAVTS RDTLAKTVYA HLFDWLVDKI 420
  421 NKSVGQDPES RFQIGVLDIY GFECFKNNSF EQFCINFANE KLQQHFNEHV FKMEQDEYRK 480
  481 EEINWSYIEF IDNQDVLDLI EKKPIGVIAL LDEACMFPRS THESFSMKLF QNFRFHPRLE 540
  541 KPKFSETDFT LSHYAGKVTY QTEAFLDKNR DYTIVEHCNL LSSSKCPFVA GIFPSAPEES 600
  601 TRSSYKFSSV SSRFKQQLQA LMETLSKTEP HYVRCVKPNS LNRPQKFESL SVLHQLRCGG 660
  661 VLEAVRISLA GYPTRRNYSD FVDRFGLLAP EFMDESNDEQ ALTEKILSKL GLGNYQLGRT 720
  721 KVFLRAGQIG ILDSRRAEVL DASARLIQRR LRTFVTHQNF ISARASAISI QAYCRGCLSR 780
  781 NAYATRRNAA AAVLVQKHVR RWLSRCAFVK LVSAAIVLQS CIRADSTRLK FSHQKEHRAA 840
  841 SLIQAHWRIH KFRSAFRHRQ SSIIAIQCRW RQKLAKREFR KLKQVANEAG ALRLAKTKLE 900
  901 KRLEDLEWRL QLEKRLRTSG EEAKSSEISK LQKTLESFSL KLDAARLATI NECNKNAVLE 960
  961 KQLDISMKEK SAVERELNGM VELKKDNALL KNSMNSLEKK NRVLEKELLN AKTNCNNTLQ1020
 1021 KLKEAEKRCS ELQTSVQSLE EKLSHLENEN QVL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [1054-1522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKTLITSPE RIGQILGEKH SSAVVPAQND RRSVFETPTP SKHIMPFSHS LSESRRSKLT  60
   61 AERNLENYEL LSRCIKENLG FNDDKPLAAC VIYKCLLHWR AFESESTAIF NIIIEGINEA 120
  121 LKGGDENGVL PYWLSNASAL LCLLQRNLRS NSFLNASAQR SGRAAYGVKS PFKLHGPDDG 180
  181 ASHIEARYPA LLFKQQLTAC VEKIYGLIRD NLKKELSPLL GSCIQAPKAS RGIAGKSRSP 240
  241 GGVPQQSPSS QWESILKFLD SLMSRLRENH VPSFFIRKLV TQVFSFINLS LFNSLLLRRE 300
  301 CCTFSNGEYV KSGISELEKW IANAKEEFAG TSWHELNYIR QAVGFLVIHQ KKKKSLDEIR 360
  361 QDLCPVLTIR QIYRISTMYW DDKYGTQSVS SEVVSQMRVL VDKDNQKQTS NSFLLDDDMS 420
  421 IPFSAEDIDK AIPVLDPSEI EPPKFVSEYT CAQSLVKKPS IASTSKQII

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.522879
Match: 2f6hX
Description: Myosin V cargo binding domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle