| Protein: | gi|42573127, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 393 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42573127, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
426.0 | [0..1] | [373..1] |
|
|
317.0 | [0..1] | [378..1] |
|
|
316.0 | [0..1] | [369..1] |
|
Region A: Residues: [1-220] |
1 11 21 31 41 51
| | | | | |
1 MRIRKGSRVE VFSNKEAPYG AWRCAEIVSG NGHTYNVRFY SFQIEHEEAV MEKVPRKIIR 60
61 PCPPLVDVER WDTGELVEVL DNFSWKAATV REELSGHYYV VRLLGTPEEL TFHKVNLRAR 120
121 KSWQDERWVA IGKISGSLKS STLTGSDVHQ KLQPHRNSMP LHEPSVVSAR LLKRPSPYNW 180
181 SECAESCTGN PKKMRSLEKE GQQQKVDAIS CRPENRGGKS
|
| Detection Method: |  |
| Confidence: | 28.0 |
| Match: | 2bkdN |
| Description: | Structure of the N-terminal domain of Fragile X Mental Retardation Protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [221-306] |
1 11 21 31 41 51
| | | | | |
1 HVQASLNNHK TGYCQIVRVR SKGFSESVRA DDCSDSDVCS VGSCSATSYD ESNMPPCMLD 60
61 GSTQQADSCS SDAESSCGLG EEPRWK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.401 | g.10.1 | Hairpin loop containing domain-like |
| View | Download | 0.401 | g.10.1 | Hairpin loop containing domain-like |
| View | Download | 0.238 | d.15.1 | Ubiquitin-like |
| View | Download | 0.212 | a.246.2 | Description not found. |
| View | Download | 0.202 | d.26.2 | Colicin E3 immunity protein |
|
Region A: Residues: [307-393] |
1 11 21 31 41 51
| | | | | |
1 HSSVGDGARN SCRSELYSYR STLGELFSSG PLSWEQEASL TDLRLSLNIS DDEHLMEEQC 60
61 CLIRACRPFA SRGLTLMLGF TPSPLTI
|
| Detection Method: | |
| Confidence: | 23.0 |
| Match: | 1utuA |
| Description: | Crystal structure of novel protein EMSY truncate |
Matching Structure (courtesy of the PDB): |
|
