| Protein: | CAP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 635 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
508.0 | [0..1] | [635..208] |
|
Region A: Residues: [1-352] |
1 11 21 31 41 51
| | | | | |
1 MALSMRKAIG VVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDQSSDKY IREILSLTSL 60
61 SRGYVHACVT SVSRRLKKTR DWIVALKALM LVHRLLNEGD PLFQEEILYA TRRGTRILNM 120
121 SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERRGRN GGGSSSSHQS NGDDGYNRSR 180
181 DDFRSPPPRT YDYETGNGFG MPKRSRSFGD VNEIGAREEK KSVTPLREMT PERIFGKMGH 240
241 LQRLLDRFLS CRPTGLAKNS RMILIAMYPV VKESFRLYAD ICEVLAVLLD KFFDMEYTDC 300
301 VKAFDAYASA AKQIDELIAF YHWCKDTGVA RSSEYPEVQR ITSKLLETLE EF
|
| Detection Method: |  |
| Confidence: | 93.522879 |
| Match: | 1hf8A |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.229007340928547 | bayes_pls_golite062009 |
|
Region A: Residues: [353-466] |
1 11 21 31 41 51
| | | | | |
1 VRDRAKRAKS PERKEIEAPP APAPPVEEPV DMNEIKALPP PENHTPPPPP APEPKPQQPQ 60
61 VTDDLVNLRE DDVSGDDQGN KFALALFAGP PANNGKWEAF SSDNNVTSAW QNPA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [467-635] |
1 11 21 31 41 51
| | | | | |
1 AELGKADWEL ALVETASNLE HQKAAMGGGL DPLLLNGMYD QGAVRQHVST SELTGGSSSS 60
61 VALPLPGKVN SHILALPAPD GTVQKVNQDP FAASLTIPPP SYVQMAEMDK KQYLLTQEQQ 120
121 LWQQYQQEGM RGQASLAKMN TAQTAMPYGM PPVNGMGPSP MGYYYNNPY
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
