| Protein: | gi|30689152 |
| Organism: | Arabidopsis thaliana |
| Length: | 504 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30689152.
| Description | E-value | Query Range |
Subject Range |
|
|
348.0 | [0..1] | [502..1] |
|
|
289.0 | [0..1] | [488..1] |
|
|
288.0 | [0..1] | [502..2] |
|
|
270.0 | [0..1] | [502..1] |
|
|
253.0 | [0..8] | [502..5] |
|
|
235.0 | [0..8] | [502..5] |
|
|
222.0 | [0..143] | [503..3] |
|
|
220.0 | [0..143] | [504..10] |
|
|
217.0 | [0..140] | [503..2] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MQNPSTVTQE SAAPVFDFFP RLRGLTSRNR SPCSNSDGYA LSSSNALYFN GFRTLPSRRM 60
61 GKTLASLSFN TKSSAGSSLR RFISDFNSFI RFHCDKVVPE SFASVGGVGL SSDENGIREN 120
121 GTGGVLGEEG LPLNGVEADR P
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.746 | c.61.1 | PRTase-like |
| View | Download | 0.649 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.612 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.612 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.599 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.564 | c.61.1 | PRTase-like |
| View | Download | 0.559 | c.55.3 | Ribonuclease H-like |
| View | Download | 0.549 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.544 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.517 | a.118.9 | ENTH/VHS domain |
|
Region A: Residues: [142-504] |
1 11 21 31 41 51
| | | | | |
1 KKVLILMSDT GGGHRASAEA IRAAFNQEFG DEYQVFITDL WTDHTPWPFN QLPRSYNFLV 60
61 KHGTLWKMTY YGTSPRIVHQ SNFAATSTFI AREIAQGLMK YQPDIIISVH PLMQHVPLRV 120
121 LRSKGLLKKI VFTTVITDLS TCHPTWFHKL VTRCYCPSTE VAKRAQKAGL ETSQIKVYGL 180
181 PVRPSFVKPV RPKVELRREL GMDENLPAVL LMGGGEGMGP IEATARALAD ALYDKNLGEA 240
241 VGQVLIICGR NKKLQSKLSS LDWKIPVQVK GFITKMEECM GACDCIITKA GPGTIAEAMI 300
301 RGLPIILNGY IAGQVSRECT VRGGKRMWEI LKITERDIED CSGLVWTGIE RVGDNVTECI 360
361 EAG
|
| Detection Method: | |
| Confidence: | 48.30103 |
| Match: | 1f0kA |
| Description: | Peptidoglycan biosynthesys glycosyltransferase MurG |
Matching Structure (courtesy of the PDB): |
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