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View Structure Prediction Details

Protein: gi|42567218, gi|...
Organism: Arabidopsis thaliana
Length: 424 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42567218, gi|....

Description E-value Query
Range
Subject
Range
gi|238479300, gi... - gi|42569183|ref|NP_179634.2| RabGAP/TBC domain-containing protein [Arabidopsis thaliana], gi|2384793...
343.0 [0..1] [422..1]

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Predicted Domain #1
Region A:
Residues: [1-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICCGFMWKS GGEDLQGFYP VREECVADVP RTRFKSRAGK TLSARKWHAA FTGDGHLDME  60
   61 RVLRRIQRGG IHPSIKGEVW EFLLGAYDPD STFEERNKLR NHRREQYYAW KEECKNMVPL 120
  121 VGSGKFVTMA VVAEDGQPLE ESSVDNQEWV VKTAITDKRV LQWMLVLSQI GLDVVRTDRY 180
  181 LCFYESESNQ ARLWDILSIY TWLNPDIGYV QGMNDICSPM IILLEDEADA FWCFERAMRR 240
  241 LRENFRTTAT SMGVQTQLGM LSQVIKTVDP RLHQHLEDLD GGEYLFAIRM LMVLFRREFS 300
  301 FLDALYLWEL MWAMEYNPNK FASYEEPQNM NNSSGQDPRL LKQYGKFERK YIKSGQNEQH 360
  361 NTLAVFVVAS VLETKNKRLL KEAKGLDDVV QILGGIAGNL DARKACKEAL KIHEKFLKKA 420
  421 NSKH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.30103
Match: 2g77A
Description: No description for 2g77A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle