YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GTG2_ARATH
Organism: Arabidopsis thaliana
Length: 467 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GTG2_ARATH.

Description E-value Query
Range
Subject
Range
gi|110737372 - gi|110737372|dbj|BAF00631.1| hypothetical protein [Arabidopsis thaliana]
540.0 [0..1] [467..1]

Back

Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYGWGIFEG MLVIGSLCLL GSAGLWFLNR RLYKEYEEKR ALVQIIFSVV FAFSCNLLQL  60
   61 VLFEIIPVLS REARMVNWKV DLFCLIVLLV FMLPYYHCYL MLRNTGVRRE RAAVGALLFL 120
  121 TAFLYAFWRM GIHFPMPSDK GFFSM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [146-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQLVSRIGVI GVTLMAVLSG FGAVNLPYSY ISLFIREIEE SEIKSLERQL MQSMETCI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [204-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKKKKILLCQ VEVERSLVSE EHQKGKSFFR RFVGTVVRSV QDDQKEQDIK LMEAEVEGLE  60
   61 ELSKQLFLEI YELRQAKDAA AFSRTWKGHV QNFLGYACSI YCVYKMLKSL QSVVFKEAG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [323-467]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKDPVTMMIS IFLQFFDIGV DAALLSQYIS LLFIGMLIVI SVRGFLTNLM KFFFAVSRVG  60
   61 SGSSSNVVLF LSEIMGMYFL SSILLIRKSL RNEYRGIITD VLGGDIQFDF YHRWFDAIFV 120
  121 ASAFLSLLLL SAHYTSRQID KHPID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle