| Protein: | PUB35_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 835 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB35_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
531.0 | [0..1] | [835..1] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI 60
61 TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT KLFVRRKVAV EVLVIESDNV 120
121 AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM
|
| Detection Method: |  |
| Confidence: | 4.47 |
| Match: | 1q77A |
| Description: | X-ray crystal structure of putative Universal Stress Protein from Aquifex aeolicus |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.41117326920761 | bayes_pls_golite062009 |
| catalytic activity | 0.787684509305028 | bayes_pls_golite062009 |
| nucleic acid binding | 0.458285295466831 | bayes_pls_golite062009 |
| DNA binding | 0.360053842784207 | bayes_pls_golite062009 |
|
Region A: Residues: [161-455] |
1 11 21 31 41 51
| | | | | |
1 PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS GSSGPTSDSS DVMSSAHDSQ 60
61 SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS 120
121 RWTPRRRDYE ERKEAMSSSS SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ 180
181 SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL 240
241 KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLE
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [456-755] |
1 11 21 31 41 51
| | | | | |
1 GTLGSPQLQY QHFAWEEIMA ATSSFSEELK IGMGAYGAVY KCNLHHTTAV VKVLQSAENQ 60
61 LSKQFQQELE ILSKIRHPHL VLLLGACPEQ GALVYEYMEN GSLEDRLFQV NNSPPLPWFE 120
121 RFRIAWEVAA ALVFLHKSKP KPIIHRDLKP ANILLDHNFV SKVGDVGLST MVQVDPLSTK 180
181 FTIYKQTSPV GTLCYIDPEY QRTGRISSKS DIYSFGMILL QLLTAKPAIA LTHFVESAMD 240
241 SNDEFLKILD QKAGNWPIEE TRELAALALC CTELRGKDRP DLKDQILPAL ENLKKVAEKA 300
301
|
| Detection Method: | |
| Confidence: | 65.0 |
| Match: | 2nruA |
| Description: | No description for 2nruA was found. |
|
Region A: Residues: [756-835] |
1 11 21 31 41 51
| | | | | |
1 RNSFSGVSTQ PPTHFICPLL KDVMNEPCVA ADGYTYDRHA IEEWLKEHNT SPMTDSPLHS 60
61 KNLLPNYTLY TAIMEWRSTR
|
| Detection Method: | |
| Confidence: | 5.46 |
| Match: | 1wgmA |
| Description: | Solution structure of the U-box in human ubiquitin conjugation factor E4A |
Matching Structure (courtesy of the PDB): |
|
