| Protein: | APBLC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 893 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APBLC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
658.0 | [0..1] | [893..1] |
|
Region A: Residues: [1-607] |
1 11 21 31 41 51
| | | | | |
1 MSGHDSKYFS TTKKGEIPEL KEELNSQYKD KRKDAVKKVI AAMTVGKDVS SLFTDVVNCM 60
61 QTENLELKKL VYLYLINYAK SQPDLAILAV NTFVKDSQDP NPLIRALAVR TMGCIRVDKI 120
121 TEYLCDPLQK CLKDDDPYVR KTAAICVAKL FDINAELVED RGFLEALKDL ISDNNPMVVA 180
181 NAVAALAEIQ ENSTSPIFEI NSTILTKLLT ALNECTEWGQ VFILDALSRY KASDPREAEN 240
241 IVERVTPRLQ HANCAVVLSA VKMILQQMEL ITSTDVIRNL CKKMAPPLVT LLSAEPEIQY 300
301 VALRNINLIV QKRPTILAHE IKVFFCKYND PIYVKMEKLE IMIKLASDRN IDQVLLEFKE 360
361 YATEVDVDFV RKAVRAIGRC AIKLERAAER CISVLLELIK IKVNYVVQEA IIVIKDIFRR 420
421 YPNTYESIIA TLCESLDTLD EPEAKASMIW IIGEYAERID NADELLESFL ENFPEEPAQV 480
481 QLQLLTATVK LFLKKPTEGP QQMIQVVLNN ATVETDNPDL RDRAYIYWRL LSTDPEAAKD 540
541 VVLAEKPVIT DDSNQLDPSL LDELLANIST LSSVYHKPPE AFVTRLKTTV QKTEDEDYVE 600
601 GSETGYP
|
| Detection Method: |  |
| Confidence: | 110.0 |
| Match: | 1w63B |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [608-893] |
1 11 21 31 41 51
| | | | | |
1 EASGNPVDGA ASPSATTGYV TKLAAAPAPV PDLLGDLMGS DNAAIVPVDE PTTPSGRPLP 60
61 VVLPASKGQG LQISAQLTRQ DGQVFYSMLL ENNSQSLLDG FMIQFNKNSF GLAAVGSLQV 120
121 PPLQPGASAR TMMPMVLSQN MSTGSTSSVL QVAVKNNQQP VWYFEDKIVL NALFSEDGRM 180
181 ERGTFLETWK SLPDSNEVQK EFPGITITSV ESTLDLLAAS NMFFIAKRKN GNQDVLYLSA 240
241 KVPRGIPFLI ELTAIVGQPG LKCAVKTPTP EIAPLFFEAV EILFKA
|
| Detection Method: | |
| Confidence: | 65.69897 |
| Match: | 1e42A |
| Description: | Beta2-adaptin AP2 ear domain, N-terminal subdomain; Beta2-adaptin AP2, C-terminal subdomain |
Matching Structure (courtesy of the PDB): |
|
