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View Structure Prediction Details

Protein: ENDO5_ARATH
Organism: Arabidopsis thaliana
Length: 296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENDO5_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593575 - gi|21593575|gb|AAM65542.1| endonuclease, putative [Arabidopsis thaliana]
453.0 [0..1] [296..1]

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Predicted Domain #1
Region A:
Residues: [1-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLWIVSVLV LTHLVHGALC WGKDGHYTVC KLAEGFFEDD TIAAVKKLLP ESVDGGGLAD  60
   61 FCSWPDEIKK LSQWQWTSTL HYVNTPEYRC NYEYCRDCHD THKHKDWCVT GAIFNYTNQL 120
  121 MSASENSQNI VHYNLTEALL FLSHYMGDVH QPLHTGFLGD LGGNTIIVNW YHNKSNLHHV 180
  181 WDNMIIDSAL ETYYNSSLPH MIQALQAKLK NGWSNDVPSW KSCHFHQKAC PNLYASESID 240
  241 LACKYAYRNA TPGTTLGDEY FLSRLPVVEK RLAQGGIRLA ATLNRIFSAK PKLAGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.39794
Match: 1ak0A
Description: P1 NUCLEASE IN COMPLEX WITH A SUBSTRATE ANALOG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.237569247811196 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle