| Protein: | gi|22328801 |
| Organism: | Arabidopsis thaliana |
| Length: | 524 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22328801.
| Description | E-value | Query Range |
Subject Range |
|
|
233.0 | [0..1] | [508..1119] |
|
|
233.0 | [0..33] | [520..300] |
|
|
201.0 | [0..33] | [515..349] |
|
|
199.0 | [0..33] | [481..277] |
|
|
197.0 | [0..1] | [391..122] |
|
|
197.0 | [0..1] | [399..267] |
|
Region A: Residues: [1-295] |
1 11 21 31 41 51
| | | | | |
1 MIILNPKTRS TLVGFAILVE VSFSKDFHDT AGLGFRCVCR WNDKKGHAHK RDNIFHCWAP 60
61 GEVVPKINDD HMFVFFDLKM HPSILFEGDV FGILADLVVF EIFPVNKQEM HVGDSCTITK 120
121 CGVYVINDAA GSSSGNTMTP QCSSMDSLKL LDGKGKKRLR VNYAGLKQRE KALFLYIACL 180
181 LGGEKADLLA QFLASTDFVI ESTLEDLAGR YLIDISSNGE VMMPPLQRNF SREIIHMLPA 240
241 STKELVSMAS GSPCNRNNDV FVSFHGKDFR KQFISDFLKK LVYKGIRICI GDKIL
|
| Detection Method: |  |
| Confidence: | 15.69897 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [296-399] |
1 11 21 31 41 51
| | | | | |
1 SRSLINKVIK ESSIAVVVFS ENYASSSLCL LQLMEIMKCW EELGQVVMPI FYKVNPSDIR 60
61 NQSGHFGKGF KKTCKKTIND ERQRWSRALT DAASIAGECS LNWA
|
| Detection Method: | |
| Confidence: | 2.33 |
| Match: | 1fywA |
| Description: | Toll-like receptor 2, TLR2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [400-524] |
1 11 21 31 41 51
| | | | | |
1 SDADMIEKVA NDIRKKLISS KKLGKQIQRV DCDHDNPWET EFNKCIERFF QLPYDGNHDE 60
61 SLVSLTTEKV IDMKQTLKEI YQITKVKLKN NLVGRRRKLS QFYDYISCKR NQGIDGCSSY 120
121 NLDTC
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.990 | N/A | N/A | a.24.18 | Description not found. |
| View | Download | 0.973 | N/A | N/A | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.944 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.910 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.908 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.864 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.763 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.741 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.729 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.729 | N/A | N/A | a.24.23 | Description not found. |
| View | Download | 0.551 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.471 | N/A | N/A | a.24.23 | Description not found. |
| View | Download | 0.463 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.401 | N/A | N/A | a.128.1 | Terpenoid synthases |
