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View Structure Prediction Details

Protein: PUP10_ARATH
Organism: Arabidopsis thaliana
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUP10_ARATH.

Description E-value Query
Range
Subject
Range
gi|115932122, gi... - gi|115932122|ref|XP_001190628.1| PREDICTED: similar to solute carrier family 35, member F4 [Strongyl...
154.0 [0..2] [388..819]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTADQELQII VRQGKEPNPT VQDERNSVSS SQAEVSHSNT YKRWLRVTLY TFFVISGQTV  60
   61 ATILGRVYYD NGGNSKWLAT VVQLVGFPVL LPYYILSFKT 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HATTDRDGKR TSPRNRVLVY VVLGLLVGAD CYLYSIGLLY LPVSTYSLIC ASQLAFNAFF  60
   61 SYFLNSQKLT PIILNSLFLL TISSTLLAFN NEETDSTKVT KGEYVKGFIC TVAASAGYGL 120
  121 VLSLQQLAFL KVLKK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.21
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [236-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNFSEVMDMI IYVSLVASCV SVVGLFASSE WKTLSSEMDN YKHGKVSYIM NLVWTAVTWQ  60
   61 VFSIGGTGLI FELSSLFSNA ISVLGLPVVP ILAVIIFHDK MNGLKVISMI LAIWGFTSYV 120
  121 YQQYLDDKNL KKNHEITTTE SPDPPEAEES TWQSK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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