| Protein: | EF103_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 282 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EF103_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
297.0 | [0..1] | [282..1] |
|
|
213.0 | [0..1] | [282..1] |
|
|
201.0 | [0..1] | [282..1] |
|
|
189.0 | [0..1] | [282..1] |
|
|
188.0 | [0..1] | [282..1] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MATPNEVSAL FLIKKYLLDE LSPLPTTATT NRWMNDFTSF DQTGFEFSEF ETKPEIIDLV 60
61 TPKPEIFDFD VKSEIPSESN DSFTFQSNPP RVTVQSNRKP PLKIAPPNRT KWIQFATGNP 120
121 KPE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [124-203] |
1 11 21 31 41 51
| | | | | |
1 LPVPVVAAEE KRHYRGVRMR PWGKFAAEIR DPTRRGTRVW LGTFETAIEA ARAYDKEAFR 60
61 LRGSKAILNF PLEVDKWNPR
|
| Detection Method: | |
| Confidence: | 27.0 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [204-282] |
1 11 21 31 41 51
| | | | | |
1 AEDGRGLYNK RKRDGEEEEV TVVEKVLKTE ESYDVSGGEN VESGLTAIDD WDLTEFLSMP 60
61 LLSPLSPHPP FGYPQLTVV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.559 | a.77.1 | DEATH domain |
| View | Download | 0.411 | a.3.1 | Cytochrome c |
| View | Download | 0.389 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.387 | a.3.1 | Cytochrome c |
| View | Download | 0.343 | a.4.1 | Homeodomain-like |
| View | Download | 0.272 | a.4.1 | Homeodomain-like |
| View | Download | 0.250 | a.7.7 | BAG domain |
