| Protein: | gi|22328699 |
| Organism: | Arabidopsis thaliana |
| Length: | 654 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22328699.
| Description | E-value | Query Range |
Subject Range |
|
|
572.0 | [0..1] | [654..1] |
|
|
496.0 | [0..1] | [653..1] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MAAGVMVTAT GAVVILYLLS RRIVWARNGE DDSGGELGKS GRSGRRRIVR RPAQAPATWL 60
61 ETISTLSETL RFTYSETLGK WPIADLAFGI NYLMRRQGNF PTASVYAG
|
| Detection Method: |  |
| Confidence: | 9.920819 |
| Match: | PF03893.7 |
| Description: | No description for PF03893.7 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.611 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.611 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.558 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.558 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.481 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.464 | N/A | N/A | a.218.1 | Description not found. |
| View | Download | 0.450 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.450 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.225 | N/A | N/A | a.240.1 | Description not found. |
| View | Download | 0.212 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.204 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
|
Region A: Residues: [109-380] |
1 11 21 31 41 51
| | | | | |
1 SNCIELKGPE IIMDLTELLR FLTLCMLFSK KPFAVFLESA GYTHEDVLLQ KPKAGIMQPA 60
61 FTIIRDTNSK CILLLIRGTH SIKDTLTAAT GAVVPFHHSV LHDGGLSNLV LGYAHCGMVA 120
121 AARWIAKLSV PCLLKALDEN PSFKVQIVGH SLGGGTASLL TYILREQKEF ASATCFTFAP 180
181 AACMTWDLAE SGKHFITTII NGSDLVPTFS ASSVDDLRSE VTSSSWSNDL RDQVEHTRVL 240
241 SVVYRSATAI GSRLPSIASA KAKVAGAGAI LR
|
| Detection Method: | |
| Confidence: | 51.522879 |
| Match: | 4tglA |
| Description: | CATALYSIS AT THE INTERFACE: THE ANATOMY OF A CONFORMATIONAL CHANGE IN A TRIGLYCERIDE LIPASE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [381-554] |
1 11 21 31 41 51
| | | | | |
1 PVSSGTQVML KRAQDVAQAV VQTRSTLSSW SCIGPRRRAI SSQLNSKVTD MPEASAIMAE 60
61 RRSTEALLAE TVAIDRKGHK RTEHSSSSSS ESDRDEPDEE EEEEPLISID QVIAETSSIE 120
121 EDVTEGELWD ELDRELTRQE NERDSEAMEE EAAAAKEITE EETVITGGGD SSTG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [555-654] |
1 11 21 31 41 51
| | | | | |
1 QNQSPVSASS MDLIENQRFY PPGKIMHIVS VTETESETER DEVVVVGTTT VERVRIYETP 60
61 RELYRKIRLS RTMINDHYMP MYKKMMELLI TELECDSHSS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.505 | N/A | N/A | d.92.1 | Metalloproteases ("zincins"), catalytic domain |
| View | Download | 0.477 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.431 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.406 | N/A | N/A | d.101.1 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
| View | Download | 0.382 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.337 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.314 | N/A | N/A | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.305 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.297 | N/A | N/A | a.4.3 | ARID-like |
| View | Download | 0.294 | N/A | N/A | g.52.1 | Inhibitor of apoptosis (IAP) repeat |
| View | Download | 0.287 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.228 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
