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View Structure Prediction Details

Protein: gi|22330983
Organism: Arabidopsis thaliana
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22330983.

Description E-value Query
Range
Subject
Range
GPAT5_ARATH - Glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=GPAT5 PE=1 SV=1
424.0 [0..6] [401..21]

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Predicted Domain #1
Region A:
Residues: [1-61]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAYILKNK DSFSYFVLLA FDASGLIRFT VMLFHWPITK LLDVLRYNNA ALKLMIFIAT  60
   61 V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [62-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLCEGEIEAV ARTVLPKFYM DDVSMDTWRV FSSCKKRVVV TGMPRVMVEI RSPRSILEPI  60
   61 MSSIHALVMH SRKIELQPVP VIFNDGRLVK RPTPATALLI LIWIPFGMVL SPIRILSGFI 120
  121 LPMWIRTHAM SILGCQIIVK GKPSQPREAV KSGVLFVWSL LLYTPFHGFP NSSLPFPYIV 180
  181 RIQRIRDVDA KTIKLDLVIC PEGSTCRQPF LLRFSALFAE LTDMIVPVAV NYRVGFFHAN 240
  241 TVRGWNCMDM IFFFMNPRPG YEVTFLNKLP VEATCLSGKK PYDVANHVQR ILADTLGFEC 300
  301 TNLTRKDKYK VLTGKDGTVS YVSFQDQAKK VVNNFNPFSH 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.36
Match: 1k30A
Description: Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle