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View Structure Prediction Details

Protein: gi|30681260, gi|...
Organism: Arabidopsis thaliana
Length: 411 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30681260, gi|....

Description E-value Query
Range
Subject
Range
gi|6056208 - gi|6056208|gb|AAF02825.1|AC009400_21 putative ATPase [Arabidopsis thaliana]
247.0 [0..1] [411..1]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLSSYLLS SPPLCKSRFS ATSLVSGIDF ISFSPRTTLS SSSTVLPAIL SLSVKHNRRR  60
   61 NSLQVKSVAS PTETISEFDE MVSGT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.522879
Match: 2v3cC
Description: No description for 2v3cC was found.

Predicted Domain #2
Region A:
Residues: [86-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRKYYMLGGK GGVGKTSCAA SLAVRFANNG HPTLVVSTDP AHSLSDSFAQ DLTGGMLVPV  60
   61 EGPEAPLFAL EINPEKAREE FRSASQMNGG TGVKDFMDGM GLGMLVEQLG ELKLGELLDT 120
  121 PPPGLDEAIA ISKVIQFLES PEYNMFTRIV FDTAPTGHTL RLLSLPDFLD ASIGKILKLR 180
  181 QKITSATSAI KSVFGKEEKG PDAADKLEKL RERMVKVREL FRDTESTEFV IVTIPTVMAV 240
  241 SESSRLSASL KKESVPVKRL IVNQLLPPSS SDCKFCSIKR KDQMRALDMI REDSELSALT 300
  301 LMEAPLVDME IRGVPALRFL GDIIWK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.045757
Match: 1f48A
Description: Arsenite-translocating ATPase ArsA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle