| Protein: | gi|42563875 |
| Organism: | Arabidopsis thaliana |
| Length: | 528 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42563875.
| Description | E-value | Query Range |
Subject Range |
|
|
257.0 | [0..1] | [523..1] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MDLEEQERDI LIQTDDDDCH VDVSYVNDDD DSNASFSLSQ NDSAFWPQSY RHSVDLLTGV 60
61 TPPMVSFIQG RSTETSFSSS IASLYKRRPT SIANSFVSST SKQPLLSEKD DVSFLSSQVG 120
121 LSNTDL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [127-528] |
1 11 21 31 41 51
| | | | | |
1 SYGEPNFCSF PQSVLNGINV LCGISLLTMP YAVKEGGWLG LCILLSFAII TCYTGILLKR 60
61 CLESSSDLRT YPDIGQAAFG FTGRLIISIL LYMELYVCCV EYIIMMSDNL SRVFPNITLN 120
121 IVGVSLDSPQ IFAISATLIV LPTVWLKDLS LLSYLSAGGV FVSILLALCL FWVGSVDGVG 180
181 FHTGGKALDL ANLPVAIGIF GFGFSGHAVL PSIYSSMKEP SKFPLVLLIS FGFCVFFYIA 240
241 VAICGYSMFG EAIQSQFTLN MPQQYTASKI AVWTAVVVPM TKYALALTPI VLGLEELMPP 300
301 SEKMRSYGVS IFIKTILVLS TLVVALTFPF FAIMGALMGS FLATLVDFIF PCLCYLSILK 360
361 GRLSKTQIGI CVFIIISGIV SGCCGTYSAI GRLVGELNWM VQ
|
| Detection Method: | |
| Confidence: | 2.02 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
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