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View Structure Prediction Details

Protein: gi|42572737
Organism: Arabidopsis thaliana
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572737.

Description E-value Query
Range
Subject
Range
DAPB2_ARATH - 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic OS=Arabidopsis thaliana GN=DAPB2 PE=2 SV...
329.0 [0..1] [343..7]

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Predicted Domain #1
Region A:
Residues: [1-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASSVFLHR PVHPHFSFSS RTNQMVPLGF KGRVSFIGNV KRCFPVVLSM GKSETFEEAG  60
   61 NSVAPGNGIS IMVNGCSGKM GKAVIKAADS AGVNIVPTSF GSVEEAGQTV EVCGKEILVH 120
  121 GPTEREKVLS SVFEKYPELI VVDYTIPSAV NDNAELYGKV GVPFVMGTTG GDRTRLYKTV 180
  181 EESKIYAVIS PQMGKQVVAF LAAMEIMSEQ FPGAFAGYSL EVMESHQASK LDASGTAKAV 240
  241 ISCFQKLGVS YDMDQIQLIR DPKQQIEVVG VPEEHVSGHA FHLYHLTSPD KTVSFEFQHN 300
  301 VCGRSIYAEG TVDAVLFLAK KIRSKAEKRI YNMIDVLREG NMR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.69897
Match: 1arzA
Description: Dihydrodipicolinate reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.01837452906823 bayes_pls_golite062009
oxidoreductase activity 1.59589847097527 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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