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View Structure Prediction Details

Protein: ZTP50_ARATH
Organism: Arabidopsis thaliana
Length: 619 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZTP50_ARATH.

Description E-value Query
Range
Subject
Range
gi|20466594, gi|... - gi|23198182|gb|AAN15618.1| unknown protein [Arabidopsis thaliana], gi|20466594|gb|AAM20614.1| unknow...
518.0 [0..25] [619..1]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVRSNILRA LIFTVLEKTC LEIKMMHSSC KGLVLLLFLF VVVFIGNTDA NAQWEVSHKV  60
   61 RASPHENMGR NVIDGSGVEK TLHDIGMGEK RGTHNKVSVS TVALFTLAMA AATGLGAVPF 120
  121 FFVELDPQWA GICNGMAAGV MLAASFDLVK EGQEHGSGNW VVTGILAGAL FI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WLCKQILEQY GEVSMLDIKG ADATKVVLVI GIMTLHSFGE GSGVGVSFAG SKGFSQGLLV  60
   61 TLAIAVHNIP EGLAVSMVLA SRGVSPQNAM LWSIITSLPQ PLVAVPAFLC ADAFSKFLPF 120
  121 CTGFAAGCMI WMVIAEVLPD AFKEASPSQV ASAATISVAS MEALSTLFES FTHDYNS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [350-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDASGFFVSL LFGLGPLLGG VFLVASAVTF RLQHALLMGV ASGIAFVLGL WRPLQLLLSA  60
   61 KMGLIPLVSL LAIGAGLSHF TSSTILNVTG RKKSRA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [446-619]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSLINPVTNF PTSVITLQSL LACGAVGFHA LAEGLALGVA APNAYGLGRH MVLPVSLHGL  60
   61 PRGTAVASCV FGATDSWHAA LAAAALIGFV GPISAIGSIL AGIDYSGLDH VMVVACGGLL 120
  121 PSFWQVIKRA VRLERRKGSV GMVLGLACAV VCLTFTRLVC LHTPYCNSAP EAVR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle