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View Structure Prediction Details

Protein: gi|22330926
Organism: Arabidopsis thaliana
Length: 338 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22330926.

Description E-value Query
Range
Subject
Range
gi|116312039, gi... - gi|125549128|gb|EAY94950.1| hypothetical protein OsI_016183 [Oryza sativa (indica cultivar-group)], ...
gi|125591085 - gi|125591085|gb|EAZ31435.1| hypothetical protein OsJ_014918 [Oryza sativa (japonica cultivar-group)]
286.0 [0..27] [337..28]

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Predicted Domain #1
Region A:
Residues: [1-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMFKTLSFL FLLCFQIHGT VAADENSLFS FNGFVKSPSF DKRVALFGDS KLVNDSSLIQ  60
   61 LTDSVTRSVG RVVYKKPINL FKGKQRNSRS FSTHFSFSSM SNEIGDDVLA FVMVPSSLDL 120
  121 SLFGKKDNSS SALGFLSQYA KNETVVAVEF GISRTGNSAR ILVGRPESAE IRNLSFVGDL 180
  181 MMDNGRTLSC MIEYEASSKR MMVRFRKSGS VKLFDPFFSF SVDLAKLWKG GEVTVGLSSA 240
  241 NGNSSSKAHF LHSWRFEIRH PPPMWMHSVP LEPNEVSKEE ENGRGRSECT RKMLGALIFG 300
  301 AACGALGALL GLYLWTICRV RRSMAVVPEE CAIEQGKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.154902
Match: 1fatA
Description: Phytohemagglutinin-L, PHA-L, also arcelin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle