| Protein: | PUB36_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 435 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB36_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
266.0 | [0..1] | [435..1] |
|
|
146.0 | [0..30] | [424..1] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MTLKIPIQEM VKMVGSLRSH GIDIPESMEI NKKEKIYVAV TEKDLESKSS LVWAIQNSGG 60
61 KEFCIVHVHQ PIPGEMFHEQ KLRLYRKEKD KAHKNSEKYL QICRQMQVTA EIIYIETDSV 120
121 EKGILQLISQ RGVTKLVMGA AADRHYSMRM RDLKSKKAIY IHR
|
| Detection Method: |  |
| Confidence: | 13.69897 |
| Match: | 2gm3A |
| Description: | No description for 2gm3A was found. |
|
Region A: Residues: [164-261] |
1 11 21 31 41 51
| | | | | |
1 EAPATCLIWF TCNGYLICSR EARRANNLYL ECASSNSLSQ SDITRGTESI VKDDDHLIKL 60
61 AVTEAEASKR KARFEACKRE EAEKTAVDAL KKAKQWEN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.671 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.627 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.581 | d.110.10 | Description not found. |
| View | Download | 0.493 | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.493 | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.482 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.457 | d.93.1 | SH2 domain |
| View | Download | 0.443 | d.217.1 | SAND domain-like |
| View | Download | 0.429 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.427 | a.39.2 | Insect pheromon/odorant-binding proteins |
|
Region A: Residues: [262-435] |
1 11 21 31 41 51
| | | | | |
1 VYFEELKQRK ETEKALRKRN DELEKMRSES ETQITESYTV IRKLQEKNNL SMETFRGIRE 60
61 EQEELKIKLR EVSKLKGKRE EEEASTSNHR EPPQYFICPI THDIMEDPHV AADGFTYEGE 120
121 AISRWFERGH ETSPMINKRL PHTSLVPNLA LRSAIQEWLQ LRELLNRPSA CREI
|
| Detection Method: | |
| Confidence: | 15.30103 |
| Match: | 2f42A |
| Description: | No description for 2f42A was found. |
