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View Structure Prediction Details

Protein: gi|42572745
Organism: Arabidopsis thaliana
Length: 404 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572745.

Description E-value Query
Range
Subject
Range
gi|42570499, gi|... - gi|7288007|emb|CAB81845.1| putative protein [Arabidopsis thaliana], gi|42570499|ref|NP_850729.2| unk...
511.0 [0..76] [404..1]

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Predicted Domain #1
Region A:
Residues: [1-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLFKLSTR RRIIIVALCI FVPDMIILVS KHVTFKFILK IFLSGDVKRR NSQRIRDLTV  60
   61 LRFAEQSLKL FLETSMVSQG MVSLTKSLCT MTPRVRLKNP NMLQKLKTGS CNFRFRNLRV 120
  121 LCTPKLSQWE PSPFIHASAE EAADIVLDKT ANVFESIVSE SAEEEKVDMS AQQRTNSQVQ 180
  181 VLKWPIWLLG PSVLLTSGMA PTLWLPLSSV FLGSNVVSLL SLIGLDCIFN LGATLFLLMA 240
  241 DSCARPKDPS QSCNSKPPFS YKFWNMFSLI IGFLVPMLLL FGSQSGLLAS LQPQIPFLSS 300
  301 AVILFPYFIL LAVQTLTEIL TWHWQSPVWL VTPVVYEAYR ILQLMRGLTL SAEVNAPVWV 360
  361 VHMLRGLVSW WVLILGMQLM RVAWFAGFAS RTTTGQQPQS VASK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.45
Match: 2gfpA
Description: No description for 2gfpA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle