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View Structure Prediction Details

Protein: MTPC3_ARATH
Organism: Arabidopsis thaliana
Length: 411 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTPC3_ARATH.

Description E-value Query
Range
Subject
Range
MTP3_ORYSJ - Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1
283.0 [0..9] [409..8]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVNYCPETP LLSSNDHEAI DHKPKLTGMV SSMKSNFFAD LPQKLRSKID PENPLHLDVS  60
   61 KAAGLKEDEK EYYERQLATL KSFEEVESFL ARSDEY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.09691
Match: 2enkA
Description: No description for 2enkA was found.

Predicted Domain #2
Region A:
Residues: [97-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TIDEKEEEED RAERAAQELA MQISNWANIF LLALKIYATV KSGSIAIAAS TLDSLLDLMA  60
   61 GGILWFTHLS MKNVNIYKYP IGKLRVQPVG IIIFAAVMAT LGFQVLLVAA EQLISNEPSE 120
  121 KMNHVQLIWL YSIMLSATAI KLVLWIYCKS SRNHIVRAYA KDHHFDVVTN VLGLVAAVLA 180
  181 NAFYWWLDPT GAILLAIYTI VNWSGTVMEN AVSLIGQSAP PEVLQKLTYL VMRQGGDNIK 240
  241 HVDTVRAYTF GVLYFVEVDI ELPEDLPLKE AHAIGESLQI KLEELPEVER AFVHLDFECH 300
  301 HKPEHSVLST IPNDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.30103
Match: 2qfiA
Description: No description for 2qfiA was found.

Predicted functions:

Term Confidence Notes
transporter activity 0.0225298510244101 bayes_pls_golite062009
transmembrane transporter activity 0.00888573638791978 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle