| Protein: | AGL16_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 240 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGL16_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
230.0 | [0..1] | [219..1] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MGRGKIAIKR INNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVIIFSS TGRLYDFSSS 60
61 SMKSVIERYS DAKGET
|
| Detection Method: |  |
| Confidence: | 21.0 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.0368771990474 | bayes_pls_golite062009 |
|
Region A: Residues: [77-240] |
1 11 21 31 41 51
| | | | | |
1 SSENDPASEI QFWQKEAAIL KRQLHNLQEN HRQMMGEELS GLSVEALQNL ENQLELSLRG 60
61 VRMKKDQMLI EEIQVLNREG NLVHQENLDL HKKVNLMHQQ NMELHEKVSE VEGVKIANKN 120
121 SLLTNGLDMR DTSNEHVHLQ LSQPQHDHET HSKAIQLNYF SFIA
|
| Detection Method: | |
| Confidence: | 17.200659 |
| Match: | PF01486.8 |
| Description: | No description for PF01486.8 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.520 | N/A | N/A | d.162.1 | LDH C-terminal domain-like |
| View | Download | 0.478 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.470 | N/A | N/A | a.87.1 | DBL homology domain (DH-domain) |
| View | Download | 0.430 | N/A | N/A | a.87.1 | DBL homology domain (DH-domain) |
| View | Download | 0.420 | N/A | N/A | a.19.1 | Fertilization protein |
