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View Structure Prediction Details

Protein: CAN1_ARATH
Organism: Arabidopsis thaliana
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAN1_ARATH.

Description E-value Query
Range
Subject
Range
CAN2_ARATH - Staphylococcal-like nuclease CAN2 OS=Arabidopsis thaliana GN=CAN2 PE=1 SV=1
418.0 [0..1] [320..1]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNAIRLLRK CLNSHGVSAS SGGVSALSRD LLNFETTSQV PEKLGSYVVS SQKAQANWYR  60
   61 KILEAWKQAK PRPKTPEEAS RLVIAALKNH QKADVEGLLS FYGLPSPHNL VEVPTEAPVS 120
  121 LPKGVRFELN TLPVDTKSVA DGDTVTVYVS SKDPLVSSSL PKDVSLAAVK RAKAREKKN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [180-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YTEADALHKT IIASGYRMIS FQNEEVLAKK FRIRLSGIDS PESKMPYGKE AHDELLKMVE  60
   61 GKCLKVLVYT EDRYGRCVGD IYCNGKFVQE VMLKKGLAWH YVAYDKRAEL AKWENEARQK 120
  121 RVGLWASSNP EKPWEWRKNK RGGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 1ey7A
Description: Staphylococcal nuclease
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.015349122465922 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle