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View Structure Prediction Details

Protein: QRT2_ARATH
Organism: Arabidopsis thaliana
Length: 439 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QRT2_ARATH.

Description E-value Query
Range
Subject
Range
gi|6648209 - gi|6648209|gb|AAF21207.1|AC013483_31 putative polygalacturonase [Arabidopsis thaliana]
370.0 [0..1] [439..1]

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Predicted Domain #1
Region A:
Residues: [1-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYEKIIILSV FLLTFLPSCF SSYPFNHRDD LFMSSNVYYE TNRQHQHGHN TRNSHLKNRH  60
   61 GYAPRSSPRS FNVNTFGAKA NGNDDSKAFM KAWEAACSST GIVYIVAPKN RDYMLKAVTF 120
  121 SGPCKSSLII FKIYGRIEAW ENPSDYKERR HWIVFENVNN LRVEGGGRID GNGHIWWPKS 180
  181 CKINPQLPCL GAPTAVTFVE CNNLRVSNIR LENAQQMHLT FQDCKNVKAL NLMVTSPADS 240
  241 PNTDGIHVSG TQNILIQDSI VRTGDDCISI VSGSENVRAT GITCGPGHGI SIGSLGEDNS 300
  301 EAYVSNVVVN KATLIGTTNG VRIKTWQGGH GMAKNIIFQD IIMKNVTNPI IINQDYCDRV 360
  361 EACPEQKSAV QVSNVLYKNI QGTSSRPIAV KFVCSKNIPC RGISMQNVKL VDQTQQDVSK 420
  421 ASCSNVKLDT RGNVSPLCT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.221849
Match: 2uveA
Description: No description for 2uveA was found.

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