| Protein: | DOF36_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 323 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DOF36_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
353.0 | [0..1] | [323..1] |
|
|
258.0 | [0..1] | [322..1] |
|
|
228.0 | [0..1] | [288..1] |
|
|
203.0 | [0..1] | [316..1] |
|
|
203.0 | [0..55] | [274..11] |
|
|
191.0 | [0..74] | [297..69] |
|
Region A: Residues: [1-200] |
1 11 21 31 41 51
| | | | | |
1 MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM 60
61 VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR HFCKTCRRYW TRGGSLRNVP 120
121 VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL 180
181 PPLQSLGDYN SSNTGLDFGG
|
| Detection Method: |  |
| Confidence: | 1.07 |
| Match: | 1jocA |
| Description: | Eea1; Eea1 homodimerisation domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [201-323] |
1 11 21 31 41 51
| | | | | |
1 TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT 60
61 RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY TSWGGNSSWT GFTSNNSTGH 120
121 LSF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.391 | d.37.1 | CBS-domain |
| View | Download | 0.364 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.350 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.300 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.297 | d.131.1 | DNA clamp |
| View | Download | 0.231 | a.118.9 | ENTH/VHS domain |
