| Protein: | gi|42572693 |
| Organism: | Arabidopsis thaliana |
| Length: | 354 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572693.
| Description | E-value | Query Range |
Subject Range |
|
|
378.0 | [0..1] | [354..1] |
|
Region A: Residues: [1-199] |
1 11 21 31 41 51
| | | | | |
1 MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM 60
61 VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR HFCKTCRRYW TRGGSLRNVP 120
121 VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL 180
181 PPLQSLGDYN SSNTGLDFG
|
| Detection Method: |  |
| Confidence: | 1.14 |
| Match: | 1jocA |
| Description: | Eea1; Eea1 homodimerisation domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [200-354] |
1 11 21 31 41 51
| | | | | |
1 GTQISNMISG MSSSGGILDA WRIPPSQQAQ QFPFLINTTG LVQSSNALYP LLEGKGGVNQ 60
61 GDSQQKSSDY SNQLMFKPLM DFSSGGVSAT QTRNVKAEEN DQDRGRDGDG VNNLSRNFLG 120
121 NININSGRNE EYTSWGGNSS WTGFTSNNST GHLSF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
