| Protein: | PUB30_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 448 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB30_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
177.0 | [0..1] | [448..1] |
|
Region A: Residues: [1-448] |
1 11 21 31 41 51
| | | | | |
1 MPMFQPLKRD GLIGFEGGGD GQVLDLDTAV KDGVLGGVNG GGVGVVDEKL DLKKMIKELD 60
61 LQDIPSVFIC PISLEPMQDP VTLCTGQTYE RLNIHKWFNL GHLTCPTTMQ ELWDDTVTPN 120
121 KTLHHLIYTW FSQKYVLMKK RSEDVQGRAI EILGTLKKAK GQARVHALSE LKQIVIAHLM 180
181 ARKTVVEEGG VSVISSLLGP FTSHAVGSEV VAILVSLDLD SDSKSGLMQP AKVSLIVDML 240
241 NDGSNETKIN CARLIRGLVE EKGFRAELVS SHSLLVGLMR LVKDKRHRNG VSPALRLLKP 300
301 ISVHKQVRSL MVSIGAVPQL VDILPSLDPE CLELALFVLD ALCTDVEGRV AVKDSANTIP 360
361 YTVRVLMRVS ENCTNYALSI LWSVCKLAPE ECSPLAVEVG LAAKLLLVIQ SGCDAALKQR 420
421 SAELLKLCSL HYSDTMFISK CKLTRTIQ
|
| Detection Method: |  |
| Confidence: | 43.0 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.373576425899935 | bayes_pls_golite062009 |
