| Protein: | gi|42572617 |
| Organism: | Arabidopsis thaliana |
| Length: | 431 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572617.
| Description | E-value | Query Range |
Subject Range |
|
|
433.0 | [0..1] | [428..1] |
|
|
421.0 | [0..1] | [428..1] |
|
|
420.0 | [0..1] | [431..1] |
|
|
415.0 | [0..1] | [428..9] |
|
|
408.0 | [0..13] | [431..13] |
|
|
398.0 | [0..1] | [431..1] |
|
|
374.0 | [0..5] | [429..11] |
|
|
373.0 | [0..1] | [429..13] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MKLLHLIFLL ALTTGISAVL IYIIGVSNLY LEALQSLQNG FQKCVSANGL GLQAAMGRDY 60
61 CKVSINFPKD TVPKWKDPKS GELEGLSYEF DLCEAVATWE QVRNSSTILT KEYIDALPNG 120
121 WEDYAWRRIN KGIQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.555 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.507 | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.459 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.436 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.404 | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
|
Region A: Residues: [135-298] |
1 11 21 31 41 51
| | | | | |
1 LNRCQNKSLC IEKLSLVLPE TPPYFPRQFG RCAVIGNSGD LLKTKFGKEI DTYDTVLREN 60
61 GAPIQNYKEY VGEKSTFRLL NRGSAKALDK VVELDEKKQE VLLVKTTIHD IMNKMIREVP 120
121 IKNPVYLMLG ASFGSAAKGT GLKALEFALS TCDSVDMYGF TVDP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [299-431] |
1 11 21 31 41 51
| | | | | |
1 GYKEWTRYFS ESRQGHTPLH GRAYYQMMEC LGLIKIHSPM RADPNRVVKW VPSRSTIRSA 60
61 RIAAEKLLRR VGAGSADPLA SCSIVKKRNK NKRPMVSHLR KPVSDHQKFV RSTSMYPVEH 120
121 SPGHGQLCIT PAD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.678 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.581 | N/A | N/A | d.379.1 | Description not found. |
| View | Download | 0.568 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.535 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.532 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.531 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.511 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.486 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.486 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.401 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.393 | N/A | N/A | a.261.1 | Description not found. |
| View | Download | 0.369 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.340 | N/A | N/A | d.326.1 | Description not found. |
