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View Structure Prediction Details

Protein: RBOHJ_ARATH
Organism: Arabidopsis thaliana
Length: 912 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for RBOHJ_ARATH.

Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNNKKVGTE DSTKWMLESV EIDPKGDSSV KQPESTINSN NPESSGAGGG ILKNVSKNLA  60
   61 VGSIIRSMSV NKWRKSGNLG SPSTR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.522879
Match: 2i0eA
Description: No description for 2i0eA was found.

Predicted Domain #2
Region A:
Residues: [86-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSGNLGPPLP VSQVKRPGPQ RVERTTSSAA RGLQSLRFLD RTVTGRERDS WRSIENRFNQ  60
   61 FAVDGRLPKD KFGVCIGMGD TLEFAAKVYE ALGRRRQIKT ENGIDKEQLK LFWEDMIKKD 120
  121 LDCRLQIFFD MCDKDGDGKL TEEEVKEVIV LSASANRLVN LKKNAASYAS LIMEELDPNE 180
  181 QGYIEMWQLE VLLTGIVSNA DSHKVVRKSQ QLTRAMIPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.39794
Match: 1s1eA
Description: Crystal Structure of Kv Channel-interacting protein 1 (KChIP-1)
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [305-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RYRTPTSKYV VVTAELMYEH WKKIWVVTLW LAVNVVLFMW KYEEFTTSPL YNITGRCLCA  60
   61 AKGTAEILKL NMALILVPVL RRTLTFLRST FLNHLIPFDD NINFHKLIAV AIAVISLLH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [424-786]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TALHMLCNYP RLSSCPYNFY SDYAGNLLGA KQPTYLGLML TPVSVTGVLM IIFMGISFTL  60
   61 AMHYFRRNIV KLPIPFNRLA GFNSFWYAHH LLVIAYALLI IHGYILIIEK PWYQKTTWMY 120
  121 VAIPMVLYAS ERLFSRVQEH NHRVHIIKAI VYSGNVLALY MTKPQGFKYK SGMYMFVKCP 180
  181 DISKFEWHPF SITSAPGDEY LSVHIRALGD WTSELRNRFA ETCEPHQKSK PSPNDLIRME 240
  241 TRARGANPHV EESQALFPRI FIKGPYGAPA QSYQKFDILL LIGLGIGATP FISILKDMLN 300
  301 NLKPGIPKTG QKYEGSVGGE SLGGSSVYGG SSVNGGGSVN GGGSVSGGGR KFPQRAYFYW 360
  361 VTR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.522879
Match: 1cqxA
Description: Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [787-912]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EQASFEWFKG VMDDIAVYDK TNVIEMHNYL TSMYEAGDAR SALIAMVQKL QHAKNGVDIV  60
   61 SESRIRTHFA RPNWRKVFSE LSNKHETSRI GVFYCGSPTL VRPLKSLCQE FSLESSTRFT 120
  121 FHKENF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.30103
Match: 1ddgA
Description: Sulfite reductase flavoprotein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle