| Protein: | gi|30680106, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 637 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30680106, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
491.0 | [0..1] | [637..1] |
|
Region A: Residues: [1-192] |
1 11 21 31 41 51
| | | | | |
1 MPEISPAELA KVSSSSSSSS SSSSGRASVK IEEIEGGAAA SGVVIVSEEL ETNPKTVVAS 60
61 IADETVAESS GTGNKSFSRV WTMPLEGSSS SDKAESSSTN QPRLDKSKTE RQQKVTHILA 120
121 EDAAKIFDDK ISAGKKLKLL NRIATVKHDG TVEFEVPADA IPQPIVVDRG ESKNGVCADE 180
181 SIDGVDLQYI PP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [193-637] |
1 11 21 31 41 51
| | | | | |
1 MQIVMLIVGT RGDVQPFVAI AKRLQDYGHR VRLATHANFK EFVLTAGLEF YPLGGDPKVL 60
61 AGYMVKNKGF LPSGPSEIPI QRNQMKDIIY SLLPACKEPD PDSGISFKAD AIIANPPAYG 120
121 HTHVAEALKI PIHVFFTMPW TPTSEFPHPL SRVKQPAGYR LSYQIVDSLI WLGIRDMVND 180
181 LRKKKLKLRP VTYLSGTQGS GSNIPHGYMW SPHLVPKPKD WGPQIDVVGF CYLDLASNYE 240
241 PPAELVEWLE AGDKPIYIGF GSLPVQEPEK MTEIIVEALQ RTKQRGIINK GWGGLGNLKE 300
301 PKDFVYLLDN VPHDWLFPRC KAVVHHGGAG TTAAGLKASC PTTIVPFFGD QPFWGERVHA 360
361 RGVGPSPIPV DEFSLHKLED AINFMLDDKV KSSAETLAKA MKDEDGVAGA VKAFFKHLPS 420
421 AKQNISDPIP EPSGFLSFRK CFGFS
|
| Detection Method: | |
| Confidence: | 34.69897 |
| Match: | 1rrvA |
| Description: | X-ray crystal structure of TDP-vancosaminyltransferase GtfD as a complex with TDP and the natural substrate, desvancosaminyl vancomycin. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 2.65148466065976 | bayes_pls_golite062009 |
| transferase activity | 1.40378926992879 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 1.18080869569902 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 0.727815347010453 | bayes_pls_golite062009 |
