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View Structure Prediction Details

Protein: gi|42565424
Organism: Arabidopsis thaliana
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42565424.

Description E-value Query
Range
Subject
Range
GDL27_ARATH, GDL... - GDSL esterase/lipase At1g59406 OS=Arabidopsis thaliana GN=At1g59406 PE=2 SV=1, GDSL esterase/lipase ...
376.0 [0..1] [349..1]

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Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLQIIWLAL VLIAVETYAV KQGKNVTIPA LIVFGDSIMD TGNNNNLPTL LKCNFPPYGK  60
   61 DYPGGFATGR FSDGRVPSDL IAEKLGLVKT LPAYMNPYLK PHDLLKGVTF ASGGTGYDPL 120
  121 TAKIMSVISV WDQLIYFKEY ISKIKRHFGE EKAKDILEHS FFLVVSSSND LAHTYLAQAH 180
  181 RYDRTSYANF LADSAVHFVR ELHKLGARKI GVFSAVPVGC VPLQRTVFGG FFTRGCNQPL 240
  241 NNMAKQFNAR LSPALDSLDK ELDGVIIYIN VYDTLFDMIQ HPKKYGFEVA DRGCCGKGLL 300
  301 TISYLCNSLN PFTCSNSSAY IFWDSYHPSE RAYQVIVDNL LDKYLSKVY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.39
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle