| Protein: | PME23_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 568 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME23_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
570.0 | [0..6] | [568..16] |
|
Region A: Residues: [1-204] |
1 11 21 31 41 51
| | | | | |
1 MGSDGDKKKK FIVAGSVSGF LVIMVVSVAV VTSKHSPKDD ENHIRKTTKA VQAVCAPTDF 60
61 KDTCVNSLMG ASPDSDDPVD LIKLGFKVTI KSINESLEKA SGDIKAKADK NPEAKGAFEL 120
121 CEKLMIDAID DLKKCMDHGF SVDQIEVFVE DLRVWLSGSI AFQQTCMDSF GEIKSNLMQD 180
181 MLKIFKTSRE LSSNSLAMVT RIST
|
| Detection Method: |  |
| Confidence: | 21.522879 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [205-568] |
1 11 21 31 41 51
| | | | | |
1 LIPNSNLTGL TGALAKYARK LLSTEDSIPT WVGPEARRLM AAQGGGPGPV KANAVVAQDG 60
61 TGQFKTITDA LNAVPKGNKV PFIIHIKEGI YKEKVTVTKK MPHVTFIGDG PNKTLITGSL 120
121 NFGIGKVKTF LTATITIEGD HFTAKNIGIE NTAGPEGGQA VALRVSADYA VFHSCQIDGH 180
181 QDTLYVHSHR QFYRDCTVSG TVDFIFGDAK CILQNCKIVV RKPNKGQTCM VTAQGRSNVR 240
241 ESTGLVLHGC HITGDPAYIP MKSVNKAYLG RPWKEFSRTI IMKTTIDDVI DPAGWLPWSG 300
301 DFALKTLYYA EHMNTGPGSN QAQRVKWPGI KKLTPQDALL YTGDRFLRGD TWIPQTQVPY 360
361 TAKV
|
| Detection Method: | |
| Confidence: | 102.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
