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View Structure Prediction Details

Protein: RECA4_ARATH
Organism: Arabidopsis thaliana
Length: 229 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RECA4_ARATH.

Description E-value Query
Range
Subject
Range
gi|25300508 - gi|25300508|pir||AE3350 recA protein [imported] - Brucella melitensis (strain 16M)
gi|17982728, gi|... - gi|17987070|ref|NP_539704.1| recombinase A [Brucella melitensis 16M], gi|17982728|gb|AAL51968.1| rec...
241.0 [0..1] [228..54]

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Predicted Domain #1
Region A:
Residues: [1-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLSRAVSPR NVPVFSTGSF ALDVALGVGG LPKGRLVEIY GPEASGKTAL ALHMLSMLLI  60
   61 RSLAKAIGVN TENLLLSQPD CGKQALSLVD TLIQSGSVDV IVVDSVSKVA ALVPKGELDG 120
  121 EMGDAHMAIQ ARLMSQALRK FSHSLLLSQT LLIFINQVRE RFGGPTEVTS GGNALKFYAP 180
  181 MRLDIKRIGL IKKGEEFFRM TKCLCLNACA HNGKSSLRED SEEQARSAI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.09691
Match: 1ubcA
Description: RecA protein, ATPase-domain; RecA protein, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle