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View Structure Prediction Details

Protein: MANP_ARATH
Organism: Arabidopsis thaliana
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MANP_ARATH.

Description E-value Query
Range
Subject
Range
MAN4_ARATH - Putative mannan endo-1,4-beta-mannosidase 4 OS=Arabidopsis thaliana GN=MAN4 PE=3 SV=1
250.0 [0..1] [349..1]

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Predicted Domain #1
Region A:
Residues: [1-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCLCFIVLL AIVIAQSYVG VEAAPSDGFV SRNGVQFILN GKPFYANGFN AYWLAYEATD  60
   61 PATRFKITNG FRNGAIYRAL QTAPGSYDEQ TFQGLDFGIA EAKRVGIKLI IPLVNNWDDY 120
  121 GGKKQYVDWA RSKGEMVSSN DDFYRNPVIK EFYKNHVKTM LNRVNTFTKV AYKDEPASMA 180
  181 WQLMNEPRCG VDRSGKTLMA WINEMALFVK SVDPNHLLST GHEGFYGDSS PERKNSLNPV 240
  241 SANTVGADFI ANHNIDAIDF ASMHCGSDLW FQRLDQNSRL AFIKRWLEGH IEDAQNNLKK 300
  301 PVILAEFGLG SDTPRYTLAN RDDVFTTTYD IIYDIYAKRR LGRGSIVLGG Y

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Detection Method: PSI-BLAST
Confidence: 47.39794
Match: 1rh9A
Description: Family GH5 endo-beta-mannanase from Lycopersicon esculentum (tomato)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.32563207632796 bayes_pls_golite062009
hydrolase activity 0.85514037342026 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 0.80912338090552 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 0.41375210927547 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle