| Protein: | CM1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 340 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CM1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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591.0 | [0..7] | [340..1] |
|
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495.0 | [0..1] | [340..1] |
|
|
441.0 | [0..54] | [340..35] |
|
|
424.0 | [0..75] | [340..3] |
|
|
424.0 | [0..75] | [339..3] |
|
|
420.0 | [0..75] | [339..3] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MEASLLMRSS CCSSAIGGFF DHRRELSTST PISTLLPLPS TKSSFSVRCS LPQPSKPRSG 60
61 TSSVHAVMTL AGSLTGKKRV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.658 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.658 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.602 | a.3.1 | Cytochrome c |
| View | Download | 0.602 | a.3.1 | Cytochrome c |
| View | Download | 0.601 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.585 | a.3.1 | Cytochrome c |
| View | Download | 0.546 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.514 | a.3.1 | Cytochrome c |
| View | Download | 0.486 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
|
Region A: Residues: [81-340] |
1 11 21 31 41 51
| | | | | |
1 DESESLTLEG IRNSLIRQED SIIFGLLERA KYCYNADTYD PTAFDMDGFN GSLVEYMVKG 60
61 TEKLHAKVGR FKSPDEHPFF PDDLPEPMLP PLQYPKVLHF AADSININKK IWNMYFRDLV 120
121 PRLVKKGDDG NYGSTAVCDA ICLQCLSKRI HYGKFVAEAK FQASPEAYES AIKAQDKDAL 180
181 MDMLTFPTVE DAIKKRVEMK TRTYGQEVKV GMEEKEEEEE EGNESHVYKI SPILVGDLYG 240
241 DWIMPLTKEV QVEYLLRRLD
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| Detection Method: | |
| Confidence: | 111.0 |
| Match: | 2csmA |
| Description: | Allosteric chorismate mutase |
Matching Structure (courtesy of the PDB): |
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