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View Structure Prediction Details

Protein: ACA9_ARATH
Organism: Arabidopsis thaliana
Length: 1086 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for ACA9_ARATH.

Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSSSNGLL LTSMSGRHDD MEAGSAKTEE HSDHEELQHD PDDPFDIDNT KNASVESLRR  60
   61 WRQAALVLNA SRRFRYTLDL NKEEHYDNRR RMIRAHAQVI RAALLFKLAG EQQIAFGSST 120
  121 PAAST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [126-1086]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNFDIDLEKL VSMTRNQNMS NLQQYGGVKG VAEKLKSNME QGINEDEKEV IDRKNAFGSN  60
   61 TYPKKKGKNF FMFLWEAWQD LTLIILIIAA VTSLALGIKT EGLKEGWLDG GSIAFAVLLV 120
  121 IVVTAVSDYR QSLQFQNLND EKRNIQLEVM RGGRTVKISI YDVVVGDVIP LRIGDQVPAD 180
  181 GVLISGHSLA IDESSMTGES KIVHKDQKSP FLMSGCKVAD GVGNMLVTGV GINTEWGLLM 240
  241 ASISEDTGEE TPLQVRLNGL ATFIGIVGLS VALVVLVALL VRYFTGTTQD TNGATQFIKG 300
  301 TTSISDIVDD CVKIFTIAVT IVVVAVPEGL PLAVTLTLAY SMRKMMADKA LVRRLSACET 360
  361 MGSATTICSD KTGTLTLNQM TVVETYAGGS KMDVADNPSG LHPKLVALIS EGVAQNTTGN 420
  421 IFHPKDGGEV EISGSPTEKA ILSWAYKLGM KFDTIRSESA IIHAFPFNSE KKRGGVAVLR 480
  481 GDSEVFIHWK GAAEIVLACC TQYMDSNGTL QSIESQKEFF RVAIDSMAKN SLRCVAIACR 540
  541 TQELNQVPKE QEDLDKWALP EDELILLAIV GIKDPCRPGV REAVRICTSA GVKVRMVTGD 600
  601 NLQTAKAIAL ECGILSSDTE AVEPTIIEGK VFRELSEKER EQVAKKITVM GRSSPNDKLL 660
  661 LVQALRKNGD VVAVTGDGTN DAPALHEADI GLSMGISGTE VAKESSDIII LDDNFASVVK 720
  721 VVRWGRSVYA NIQKFIQFQL TVNVAALIIN VVAAMSSGDV PLKAVQLLWV NLIMDTLGAL 780
  781 ALATEPPTDH LMHRTPVGRR EPLITNIMWR NLLVQSFYQV AVLLVLNFAG LSILGLNHEN 840
  841 HAHAVEVKNT MIFNAFVMCQ IFNEFNARKP DEMNVFRGVN KNPLFVAIVG VTFILQIIIV 900
  901 TFLGKFAHTV RLGWQLWLAS IIIGLVSWPL AIVGKLIPVP KTPMSVYFKK PFRKYKASRN 960
  961 A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 3b8eA
Description: No description for 3b8eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle