| Protein: | gi|42572475 |
| Organism: | Arabidopsis thaliana |
| Length: | 349 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572475.
| Description | E-value | Query Range |
Subject Range |
|
|
642.0 | [0..1] | [349..1] |
|
|
486.0 | [0..1] | [342..1] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MGRPPSNGGP AFRFILPEVT EMEAILLQHN TAMPGRHILE ALADKFSESP ERKGKVVVQF 60
61 KQIWNWFQNR RYALRARGNK APGKLNVSSM PRMDLPNQMR SVIQPLSVPK TTHMTGNLPG 120
121 MTPAPSGSLV PGVMRSGSDN
|
| Detection Method: |  |
| Confidence: | 1.24 |
| Match: | 2da6A |
| Description: | No description for 2da6A was found. |
|
Region A: Residues: [141-257] |
1 11 21 31 41 51
| | | | | |
1 SYLEFEAKSA RDGAWYDVQA FLAHRNLEIG DPEVQVRFAG FEVEEDEWIN VKKHVRQRSL 60
61 PCEASECVAV LAGDLVLCFQ EGKDQALYFD AIVLDAQRRR HDVRGCRCRF LVRYSHD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.344 | N/A | N/A | c.23.3 | Hypothetical protein MTH538 |
| View | Download | 0.344 | N/A | N/A | c.23.3 | Hypothetical protein MTH538 |
| View | Download | 0.316 | N/A | N/A | d.58.57 | Description not found. |
| View | Download | 0.285 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.285 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.272 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.259 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.259 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.235 | N/A | N/A | g.52.1 | Inhibitor of apoptosis (IAP) repeat |
| View | Download | 0.211 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
|
Region A: Residues: [258-349] |
1 11 21 31 41 51
| | | | | |
1 QSEQEIVPLR KICRRPETDY RLQQLHNAVN DLANSNQHQI PALDAAAKTP LSLPGATVPI 60
61 VAPESKDPSL SATPATLVQP SSNAATVPAG SA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.533 | a.7.16 | Description not found. |
| View | Download | 0.428 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.337 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.337 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.321 | a.29.8 | Description not found. |
| View | Download | 0.278 | a.7.14 | Description not found. |
| View | Download | 0.269 | d.226.1 | GIY-YIG endonuclease |
| View | Download | 0.260 | a.39.1 | EF-hand |
| View | Download | 0.257 | a.74.1 | Cyclin-like |
| View | Download | 0.252 | d.225.1 | Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains |
