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View Structure Prediction Details

Protein: LPP4_ARATH
Organism: Arabidopsis thaliana
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LPP4_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593222 - gi|21593222|gb|AAM65171.1| diacylglycerol pyrophosphate phosphatase, putative [Arabidopsis thaliana]
219.0 [0..1] [308..1]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKIMLGSHS VKSHGWKVAR EHLCDWLILV VLGLIDIVLN VIEPFHRYIG PDMLTDLTFP  60
   61 FYEDTI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [67-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PMWAVPIICI LVPICIFIVY YYYRRDVYDL HHAILGIGFS CLVTGVTTDS IKDAVGRPRP  60
   61 NFFYRCFPNG KPKFHPDTKD VVCHGVKKII KEGYKSFPSG HTSWSFAGLT FLAWYLSGKI 120
  121 KVFDRRGHVA KLCLVFLPIL ISILIGISRV DDYWHHWTDV FAGAIIGIFV ASFSYLHFFP 180
  181 YPYDENGWAP HAYFRMLAER STGRATTMTR TGSRGMLGND VEPGNSASSP HDRHRESTDS 240
  241 DF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.39794
Match: 1iw8A
Description: Bacterial acid phosphatase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle