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View Structure Prediction Details

Protein: MPK9_ARATH
Organism: Arabidopsis thaliana
Length: 510 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MPK9_ARATH.

Description E-value Query
Range
Subject
Range
gi|110180202 - gi|110180202|gb|ABG54336.1| double HA-tagged mitogen activated protein kinase 9 [synthetic construct...
461.0 [0..1] [510..1]

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Predicted Domain #1
Region A:
Residues: [1-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPHKKVALE TEFFTEYGEA SRYQIQEVIG KGSYGVVASA IDTHSGEKVA IKKINDVFEH  60
   61 VSDATRILRE IKLLRLLRHP DIVEIKHVML PPSRREFRDI YVVFELMESD LHQVIKANDD 120
  121 LTPEHYQFFL YQLLRGLKFI HTANVFHRDL KPKNILANSD CKLKICDFGL ARVSFNDAPS 180
  181 AIFWTDYVAT RWYRAPELCG SFFSKYTPAI DIWSIGCIFA EMLTGKPLFP GKNVVHQLDI 240
  241 MTDLLGTPPP EAIARIRNEK ARRYLGNMRR KPPVPFTHKF PHVDPLALRL LHRLLAFDPK 300
  301 DRPSAEEALA DPYFYGLANV DREPSTQPIP KLEFEFERRK ITKEDVRELI YREILEYHPQ 360
  361 MLQEYLRGGE QT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.39794
Match: 2baqA
Description: p38alpha bound to Ro3201195
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [373-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFMYPSGVDR FKRQFAHLEE NYGKGEKGSP LQRQHASLPR ERVPAPKKEN GSHNHDIENR  60
   61 SIASLVTTLE SPPTSQHEGS DYRNGTSQTG YSARSLLKSA SISASKCIGM KPRNKSEYGE 120
  121 SNNDTVDALS QKVAALHT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle