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View Structure Prediction Details

Protein: FBK59_ARATH
Organism: Arabidopsis thaliana
Length: 388 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBK59_ARATH.

Description E-value Query
Range
Subject
Range
FBK59_ARATH - F-box/kelch-repeat protein At3g17530 OS=Arabidopsis thaliana GN=At3g17530 PE=2 SV=1
234.0 [0..1] [388..5]

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Predicted Domain #1
Region A:
Residues: [1-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMISDLPHDL ESEILSRVPA KSLAKWKTTC KRWYALFRDP SFVKKNFDKA GGREMIVLMN  60
   61 SRVYSNSVNL QGINNRFDPS MEVTGKLIKL NDSKGVDISA IFHCDGLILC TTTESTGLVV 120
  121 WNPCTGEIRC IKPRIFYRCN DRYALGYGNS KSSCHSYKIL RSCCYYVDQN LSLMAAEFEI 180
  181 YDFSTDSWRD LGDITRDMIV YSSGVSLKGN TYWVSGSKEK GFFMRYFDFS KEVFGRLPLP 240
  241 YQSFNANHTA ALSAVGNEKI AVLQQKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.09691
Match: 2ovpB
Description: No description for 2ovpB was found.

Predicted Domain #2
Region A:
Residues: [268-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAMSDEMRIW VTNKIDEAKD LSWSNFLLTV DYGKFNLPCL VNVTSFLLDE ENKVAVCSDV  60
   61 DTKDGLRSRI YIVGKDFYKE VFKDTRGSDN NWPLLLCYVP SLVSIQENIP NKAEENEIKG 120
  121 G

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 19.69897
Match: PF07734.4
Description: No description for PF07734.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.852 N/A N/A d.129.1 TATA-box binding protein-like
View Download 0.852 N/A N/A d.129.1 TATA-box binding protein-like
View Download 0.702 N/A N/A b.1.1 Immunoglobulin
View Download 0.702 N/A N/A b.1.1 Immunoglobulin
View Download 0.680 N/A N/A b.1.1 Immunoglobulin
View Download 0.613 N/A N/A d.129.1 TATA-box binding protein-like
View Download 0.603 N/A N/A d.129.1 TATA-box binding protein-like
View Download 0.553 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.553 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.527 N/A N/A b.1.1 Immunoglobulin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle