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View Structure Prediction Details

Protein: gi|15228974
Organism: Arabidopsis thaliana
Length: 112 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15228974.

Description E-value Query
Range
Subject
Range
gi|15237979, gi|... - gi|9759436|dbj|BAB10233.1| unnamed protein product [Arabidopsis thaliana], gi|15237979|ref|NP_199505...
120.0 [0..3] [111..62]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMVVGVAMG NIALGAETVG QINEAYKTKP MLKKPLDECS MRYKTIVDVD VHTAIISIKG  60
   61 NPKFAEGAVV DAGVEASICE GGFTKGQSPL TSLTQRMEKI CDVTRAIIRM LL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.045757
Match: 1rj1A
Description: Crystal Structure of a Cell Wall Invertase Inhibitor from Tobacco
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle