| Protein: | ATL6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 398 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
274.0 | [0..7] | [398..1] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL 60
61 FFMGFFSIYF RHCSGVPDA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [80-173] |
1 11 21 31 41 51
| | | | | |
1 GVSPAGGARS RATVNAAARG LDVSVVETFP TFLYSDVKTQ KLGKGELECA ICLNEFEDDE 60
61 TLRLLPKCDH VFHPHCIDAW LEAHVTCPVC RANL
|
| Detection Method: | |
| Confidence: | 13.221849 |
| Match: | 1iymA |
| Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [174-398] |
1 11 21 31 41 51
| | | | | |
1 AEQVAEGESV EPGGTEPDLE LQQVVVNPEP VVTAPVPEQL VTSEVDSRRL PGVPVDLKRV 60
61 KFSRSHTTGH SVVQPGECTE RFTLRLPEDV RKRIMKDWKL NRTNSLLVLP RGGSSRRGKP 120
121 IDRSRARSDR WLFRKTPSFL WRSRDDGSIR LGATGSVRAS AVPNSTGSDS VRAGDRWAFL 180
181 RNASFLWRNS SVHVPRGGVN KDGEGTSVKS TGASGSTSGS VRLPV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
