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View Structure Prediction Details

Protein: CYP37_ARATH
Organism: Arabidopsis thaliana
Length: 466 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYP37_ARATH.

Description E-value Query
Range
Subject
Range
TL38_ARATH, CYP3... - (P82869) Peptidyl-prolyl cis-trans isomerase TLP38, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rot...
404.0 [0..1] [466..1]
gi|61372665 - gi|61372665|gb|AAX43885.1| peptidylprolyl isomerase-like 2 [synthetic construct]
311.0 [0..92] [464..116]
gi|13366579, gi|... - gi|22547215|ref|NP_680481.1| peptidylprolyl isomerase-like 2 isoform b [Homo sapiens], gi|13366579|g...
gi|60655445 - gi|60655445|gb|AAX32286.1| peptidylprolyl isomerase-like 2 [synthetic construct]
311.0 [0..92] [464..116]
gi|73995933 - gi|73995933|ref|XP_860552.1| PREDICTED: similar to peptidylprolyl isomerase-like 2 isoform b isoform...
310.0 [0..92] [464..116]
gi|26349387 - gi|26349387|dbj|BAC38333.1| unnamed protein product [Mus musculus]
310.0 [0..92] [464..116]
gi|114685302 - gi|114685302|ref|XP_515004.2| PREDICTED: peptidylprolyl isomerase-like 2 isoform 2 [Pan troglodytes]
310.0 [0..92] [464..116]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPLSSSTV VSHRLFFLHP SPLNRKFLFV KPKLPFNRTN SGDFRMRLHS TSSKTGTKEL  60
   61 IHSCNSSIDS KLNTFEAGSK NLEKLVATIL IFVQV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WSPLPLFGLD SAYISPAEAV LYSPDTKVPR TGELALRRAI PANPSMKIIQ ASLEDISYLL  60
   61 RIPQRKPYGT MESNVKKALK VAIDDKDKIL ASIPVDLKDK GSELYTTLID GKGGLQALIT 120
  121 SIKKQDPDKV SLGLAASLDT VADLELLQAS GLSFLLPQQY LNYPRLAGRG TVEITIEK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.69897
Match: 2cqbA
Description: Solution Structure of the RNA recognition motif in Peptidyl-prolyl cis-trans isomerase E
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [274-466]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADGSTFSAEA GGDQRKSATV QIVIDGYSAP LTAGNFAKLV TSGAYDGAKL NTVNQAVITE  60
   61 DGSGKVESVS VPLEVMPSGQ FEPLYRTPLS VQDGELPVLP LSVYGAVAMA HSENSEEYSS 120
  121 PYQFFFYLYD KRNSGLGGLS FDEGQFSVFG YTIAGKDILG QIKTGDIIKS AKLIEGQDRL 180
  181 SLPVQNNNIN EST

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.154902
Match: 1m9eA
Description: Cyclophilin (eukaryotic)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle